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SysGenSIM 1.0.0


Ultrabook / Netbook Software Downloads » Education Softwares » SysGenSIM 1.0.0
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Date Added:

 Jul 20, 2011 08:54 AM

Publisher's Description:

 SysGenSIM is a bioinformatics toolbox for MATLAB® to create artificial gene expression datasets by simulating Systems Genetics experiments.
News
2011-07-13
SysGenSIM 1.0.0 has been released with minor new features to celebrate paper acceptance!
2011-06-17
SysGenSIM 0.2.2 has been released with minor bug fixes and the manual included!
2011-06-13
The manual is now on a Wiki.
2011-06-03
SysGenSIM 0.2.1 has been released with minor bug fixes!
2011-05-31
SysGenSIM 0.2 has been released with major bug fixes!
Requirements

To run SysGenSIM you need Mathworks MATLAB® version 7.9 (R2009b) or later, with Bioinformatics and Statistics toolboxes.
Publications

SysGenSIM is described in this paper:
A. Pinna, N. Soranzo, I. Hoeschele, A. de la Fuente
“Simulating system genetics data with SysGenSIM”
Bioinformatics, Advance Access, 2011
Article

We kindly ask you to cite the previous paper in your publications if you use SysGenSIM in your work.

Data produced with SysGenSIM have been already used for the following scientific papers:
A. Pinna, N. Soranzo, A. de la Fuente
“From Knockouts to Networks: Establishing Direct Cause-Effect Relationships through Graph Analysis”
PLoS ONE 5(10), e12912, 2010
Article
B. Liu, A. de la Fuente, I. Hoeschele
“Gene Network Inference via Structural Equation Modeling in Genetical Genomics Experiments”
Genetics 178(3), pp. 1763-1776, 2008

Screenshot:

 Screenshot

Documentation:

 http://sysgensim.sourceforge.net/

Last Download:

 Apr 17, 2024 11:59 AM

Downloads:

 306

OS:

 Windows

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