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SimTK ISIM Interface 1.3.301_302


Netbook Software Downloads » Education Softwares » SimTK ISIM Interface 1.3.301_302
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Date Added:

 Aug 25, 2011 11:31 PM

Publisher's Description:

 SimTK ISIM interface a simple Java graphical user interface for running the program ISIM. ISIM is package that simulates the thermodynamic ensemble of ions around a macromolecule using a grand canonical Monte Carlo scheme and simple hard sphere ion models. It is meant to provide an alternative mechanism to mean field approaches to allow the calculation of ion distributions around a highly charged molecule using a simple model that takes into account ion-ion correlations and steric interactions. The original source was created in the McCammon group at UCSD (http://mccammon.ucsd.edu/isim/). The version of ISIM used is available in the ISIM project on simtk.org.

Purpose/Synopsis: SimTK ISIM interface provides a simple graphical interface for running the programs APBS and ISIM. This is closely related to the ISIM project on simtk.org.

Audience: Researchers interested in simulating the ionic environment around macromolecules.
Long Term Goals and Related Uses: Provide a simple interface to guide users through the process of preparing a structure file, running APBS, running ISIM, and examining the results.

Documentation:

 https://simtk.org/home/isim_interface

Last Download:

 May 16, 2012 08:02 PM

Downloads:

 18

OS:

 Windows

Rating:
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SimTK ISIM Interface 1.3.301_302
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